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Using Abaqus Student version for mollecular modeling (input file xx.pdb)
Sun, 2014-01-26 04:53 - mweka007
Dear all,
I am a new abaqus users, I would like to compute FEM for given .pdb. Any suggestion or advice.
Thank you in advance for you response.
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Abaqus
Hi, What are you trying to do in Abaqus?
I am also from NTU, have been working in abaqus for sometime..
Bernad
Hi Bernad,
Hi Bernad,
Sorry my late reply, in Abaqus I;m running Normal Mode Analysis for a protein.
christian
Hi Bernard,
Hi Bernard,
Well, I have already got my .odb, .fil, .dat of my protein now want to extract Eigenvector for each mode then compute the Protein B-factor.
Christian,
bope0001@e.ntu.edu.sg
Extract EigenVector for each mode 3Nx3N
Any idea how to extract eigenvector for each mode in .odb file?
I have the Eigenvalue, Freq and generalized mass.
The problem is I need to extract the eigenvector (3Nx3N) which mean that the first 6 should be zero of all mode which will be use to calculate the Boltzman factor (B-Factor) for my protein.
Regards,
Christian