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 <title>iMechanica - cellular tractions - Comments</title>
 <link>http://imechanica.org/taxonomy/term/1967</link>
 <description>Comments for &quot;cellular tractions&quot;</description>
 <language>en</language>
<item>
 <title>Thanks to Vesna and Ning</title>
 <link>http://imechanica.org/node/2786#comment-6712</link>
 <description>&lt;p&gt;Thanks to you for the input. It helps a lot.&lt;/p&gt;
&lt;br class=&quot;clear&quot; /&gt;</description>
 <pubDate>Thu, 06 Mar 2008 08:27:26 -0500</pubDate>
 <dc:creator>Yujie Wei</dc:creator>
 <guid isPermaLink="false">comment 6712 at http://imechanica.org</guid>
</item>
<item>
 <title>Thanks for references</title>
 <link>http://imechanica.org/node/2786#comment-6710</link>
 <description>&lt;p&gt;
Thanks for references Ning.
&lt;/p&gt;
&lt;p&gt;
I&amp;#39;d add to Yujie: as I pointed out earlier, Tan et al used micro-needles which affect where and how cell forms adhesions, so I wouldn&amp;#39;t compare that experiment with the others.&amp;nbsp; And just in general, different types of cells generate different levels and distribution of traction.&amp;nbsp; Fish scale keratocytes are very fast migrating cells with quite weak tractions distributed side-to-middle (almost perpendicular to the direction of motion), while fibroblast are quite slower but with considerable tractions that are oriented front-to-back (axially).&amp;nbsp;
&lt;/p&gt;
&lt;br class=&quot;clear&quot; /&gt;</description>
 <pubDate>Thu, 06 Mar 2008 01:37:57 -0500</pubDate>
 <dc:creator>Vesna Damljanovic</dc:creator>
 <guid isPermaLink="false">comment 6710 at http://imechanica.org</guid>
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<item>
 <title>Cell stiffness is a key parameter in substrate stiffness sensing</title>
 <link>http://imechanica.org/node/2786#comment-6707</link>
 <description>&lt;p&gt;
&lt;font size=&quot;3&quot;&gt;Teng, It is nice that you have an interest in this fascinating field. &lt;/font&gt;
&lt;/p&gt;
&lt;p&gt;
&lt;font size=&quot;3&quot;&gt;We first reported the linear relationship between cell traction and cell stiffness in human airway smooth muscle cells and endothelial cells (Wang et al, PNAS, 2001, Am J Physiol Cell, 2002). Discher&amp;#39;s lab then found similar relationship in skeletal muscle cells (Biophys J, 04).&lt;/font&gt;
&lt;/p&gt;
&lt;p&gt;
&lt;font size=&quot;3&quot;&gt;YL Wang first reported&amp;nbsp; that tractions increase with substrate stiffness in fibroblasts (HB Wang et al, 2000).&amp;nbsp; Discher et al found the same behavior in HMS cells (Cell, 06).&amp;nbsp; Recently PA Jamney lab showed cell stiffness increased with substrate stiffness (Biophys J, 07).&lt;/font&gt;
&lt;/p&gt;
&lt;p&gt;
&lt;font size=&quot;3&quot;&gt;With all these findings, one may conclude that cells match their stiffness with substrate stiffness via the action of tractions, that, in turn, is controlled by the prestress (active contractile myosin-dependent forces).&amp;nbsp; The molecular and biochemical mechanisms are not clear yet.&amp;nbsp; But one big picture is beginning to be clear: cell stiffness/cell traction is a key parameter in substrate stiffness sensing.&amp;nbsp; Maybe to regulate intracellular strains?&lt;/font&gt;
&lt;/p&gt;
&lt;p&gt;
&lt;font size=&quot;3&quot;&gt;&lt;br /&gt;
&amp;nbsp;&lt;br /&gt;
&lt;/font&gt;
&lt;/p&gt;
&lt;p&gt;
&lt;font size=&quot;3&quot;&gt;To Yujie: those high tractions have been reported by YL Wang&amp;#39;s lab in newly-formed focal complexes.&amp;nbsp; The biological significance is not clear.&lt;/font&gt;
&lt;/p&gt;
&lt;br class=&quot;clear&quot; /&gt;</description>
 <pubDate>Wed, 05 Mar 2008 17:41:52 -0500</pubDate>
 <dc:creator>Ning Wang</dc:creator>
 <guid isPermaLink="false">comment 6707 at http://imechanica.org</guid>
</item>
<item>
 <title>Matrix stiffness directs how human stem cells differentiate</title>
 <link>http://imechanica.org/node/2786#comment-6706</link>
 <description>&lt;p&gt;
&lt;font size=&quot;2&quot;&gt;I&amp;#39;ve been following this interesting and informative thread of discussion. Here are some aspects I&amp;#39;d like to learn more:&lt;/font&gt;
&lt;/p&gt;
&lt;p&gt;
&lt;font size=&quot;2&quot;&gt;Ning mentioned that one of the primary known function of cell traction is to sense matrix rigidity. I came across the following paper showing, by changing the matrix stiffness, human mesenchymal stem cells can be directed along neuronal, muscle, or bon lineages.&lt;/font&gt;
&lt;/p&gt;
&lt;p&gt;
&lt;font size=&quot;2&quot;&gt;&lt;strong&gt;Matrix Elasticity Directs Stem Cell Lineage Specification. &lt;/strong&gt;&lt;/font&gt;
&lt;/p&gt;
&lt;p&gt;
&lt;font size=&quot;2&quot;&gt;Cell,Volume126,Issue 4,Pages 677-689&lt;/font&gt;
&lt;/p&gt;
&lt;p&gt;
&lt;font size=&quot;2&quot;&gt;A.Engler,S.Sen,H.Sweeney,D.Discher&lt;/font&gt;
&lt;/p&gt;
&lt;p&gt;
&lt;font face=&quot;Times&quot; size=&quot;2&quot; color=&quot;#666666&quot;&gt;&lt;a href=&quot;http://dx.doi.org/10.1016/j.cell.2006.06.044&quot; target=&quot;doilink&quot;&gt;doi:10.1016/j.cell.2006.06.044&lt;/a&gt;&amp;nbsp;&amp;nbsp; &lt;br /&gt;
&lt;/font&gt;
&lt;/p&gt;
&lt;p&gt;
&lt;font size=&quot;2&quot;&gt;The paper also showed an approximately linear relation between the cell stress (traction) and the matrix stiffness.&amp;nbsp; My question is, have similar behaviors reported in this paper been observed in other types of cells? For example, when cells sense the rigidity of the matrix, how do they respond in terms of traction, intracellular strain? Any mechanical quantities of the cells possibly remain unchanged? &amp;nbsp;&lt;/font&gt;
&lt;/p&gt;
&lt;p&gt;
Thanks for your comments.&amp;nbsp;
&lt;/p&gt;
&lt;br class=&quot;clear&quot; /&gt;</description>
 <pubDate>Wed, 05 Mar 2008 11:31:00 -0500</pubDate>
 <dc:creator>Teng Li</dc:creator>
 <guid isPermaLink="false">comment 6706 at http://imechanica.org</guid>
</item>
<item>
 <title>The magnitude of in plane traction</title>
 <link>http://imechanica.org/node/2786#comment-6704</link>
 <description>&lt;p&gt;
The discussion is really nice. I have two questions on the magnitude of traction in cell cytoskeletal, maybe Wesna, Ning, or others can shed light on them.
&lt;/p&gt;
&lt;p&gt;
In Tan et al.&amp;#39;s experiments, two types of traction in focal adhesion is reported, with one (in focal adhesion spots of size less than 1 micron^2) much higher than the other (larger focal adhesion size with a traction about 5.5 kPa). Others only observed a maximum traction in the range of 5.5 kPa (Dembo and Wang, Balaban et al., du Roure et al.). Is there any biologic explanation on the differences in these observations? Also, what is the biological process to maintain a saturated traction on the order of 5.5 kPa?&amp;nbsp;
&lt;/p&gt;
&lt;p&gt;
Many thanks.
&lt;/p&gt;
&lt;p&gt;
&amp;nbsp;
&lt;/p&gt;
&lt;br class=&quot;clear&quot; /&gt;</description>
 <pubDate>Wed, 05 Mar 2008 09:48:56 -0500</pubDate>
 <dc:creator>Yujie Wei</dc:creator>
 <guid isPermaLink="false">comment 6704 at http://imechanica.org</guid>
</item>
<item>
 <title>Traction distribution not magnitude is important for migration</title>
 <link>http://imechanica.org/node/2786#comment-6698</link>
 <description>&lt;p&gt;
Ditto, Ning.
&lt;/p&gt;
&lt;p&gt;
&amp;nbsp;Also, you wrote: &amp;quot;As to cell migration, it is just so peculiar that the cell would generate such an unnecessarily high magnitude of traction for cell migration.&amp;quot;
&lt;/p&gt;
&lt;p&gt;
Cells are definitely not generating tractions specifically for migration.&amp;nbsp; My old experiment I mentioned shows that clearly: when you knock-out paxillin (key migration-related protein), it completely kills migration, but the cell is still applying tractions, often higher than a migrating cell.&amp;nbsp; &lt;/p&gt;
&lt;p&gt;Tractions are always generated by a normal adherent cell.&amp;nbsp;
&lt;/p&gt;
&lt;p&gt;
It is the distribution of the tractions between the rear and the front--not the absolute magnitude--that is &amp;#39;used&amp;#39; in migration by setting up the direction of migration.
&lt;/p&gt;
&lt;p&gt;
Incidentally, directionallity is pretty important but apparently quite hard to characterize due to lack of good reference due to large &amp;#39;deformation&amp;#39; of the cell shape, at least for cells like fibroblasts (myocytes and keratocytes, for example, maintain the self-similar shape).&amp;nbsp; That is another interesting topic.
&lt;/p&gt;
&lt;br class=&quot;clear&quot; /&gt;</description>
 <pubDate>Tue, 04 Mar 2008 19:01:18 -0500</pubDate>
 <dc:creator>Vesna Damljanovic</dc:creator>
 <guid isPermaLink="false">comment 6698 at http://imechanica.org</guid>
</item>
<item>
 <title>Tractions are for shape stability/substrate rigidity sensing </title>
 <link>http://imechanica.org/node/2786#comment-6695</link>
 <description>&lt;p&gt;It appears that some of us would agree that primary known functions of tractions are for cell shape stability (our papers in 01, 02; Discher papers, 04, 06, etc) and substrate rigidity sensing (YL Wang papers, Discher papers, Janmey papers, etc).&amp;nbsp; As to cell migration, it is just so peculiar that the cell would generate such an unnecessarily high magnitude of traction for cell migration.&amp;nbsp; In YL Wang&amp;#39;s 06 paper, &amp;quot;inhibition of tractions&amp;quot; simply states the fact that tractions are much lower than controls after various interventions.&amp;nbsp; We will see how this issue raised by YL Wang&amp;#39;s lab will be addressed in the future by other labs.&lt;/p&gt;
&lt;br class=&quot;clear&quot; /&gt;</description>
 <pubDate>Tue, 04 Mar 2008 15:23:20 -0500</pubDate>
 <dc:creator>Ning Wang</dc:creator>
 <guid isPermaLink="false">comment 6695 at http://imechanica.org</guid>
</item>
<item>
 <title> wrinkled substrates</title>
 <link>http://imechanica.org/node/2786#comment-6694</link>
 <description>&lt;p&gt;
Thanks for mentioning wrinkled substrate.&amp;nbsp; That was the first elastic substrate used before Dembo &amp;amp; Jacobson gave them up, mostly because of painstaking trial-and-error in fabricating the substrate of just the right stiffness to give enough visible wrinkles but not get completely unstable.&amp;nbsp; Switching to thick gels provided more controlled substrate.
&lt;/p&gt;
&lt;p&gt;
&amp;nbsp;Problem with wrinkles is that they are non-linear.&amp;nbsp; Try to calculate tractions from that kind of displacement field, even if you can accurately image it (the deformation)...&amp;nbsp; There is some interesting work on thin film wrinkling by Gioia in 90&amp;#39;s (at UIUC) that could be used but no-one tried.&amp;nbsp; No wonder, because it would have been more difficult and computationally involved than Boussinesq stuff.
&lt;/p&gt;
&lt;p&gt;
&amp;nbsp;The only measurement I saw so far is that of geometric characteristics of the deformation followed by &amp;#39;calibration&amp;#39; for some generalized force.&amp;nbsp;&amp;nbsp; This method cannot capture the local gradients and, most importantly, cell deforms the substrate so much that the wrinkles themselves affect the subsequent force direction (analogously to the micro-needles).&amp;nbsp; Keratocytes are wonderful model cells in that they have a very symmetric and reliable force field, so they may not be affected so much, but fibroblast or any other unordered cell will be adjusting the forces to match the wrinkles (perpendicular to them).&amp;nbsp;
&lt;/p&gt;
&lt;br class=&quot;clear&quot; /&gt;</description>
 <pubDate>Mon, 03 Mar 2008 23:35:38 -0500</pubDate>
 <dc:creator>Vesna Damljanovic</dc:creator>
 <guid isPermaLink="false">comment 6694 at http://imechanica.org</guid>
</item>
<item>
 <title>Measurement of tractions and speculation on their use in biology</title>
 <link>http://imechanica.org/node/2786#comment-6692</link>
 <description>&lt;p&gt;
I read this discussion with interest; let me add my two cents worth to this, after warning you that I don&amp;#39;t know much about the literature in the field.
&lt;/p&gt;
&lt;p&gt;
In some random searches regarding wrinkling some years ago, I came across the following: Burton et al&amp;nbsp; (Burton Jung and Taylor, 1999, Keratocytes generate traction forces in two phases. Mol Biol Cell. 10:3745-3769) measured wrinkle lengths on silicone substrates and estimated the tractions. Since they calibrated this with direct measurements using microneedles, I believe measurement accuracy is quite good. Their paper indicates&amp;nbsp;that they were able to measure from a few nanonewtons to a few hundered nanonewtons. I think this circumvents the issues related to the Bernoulli-Euler beam or the Boussinesq solution that are used in the two methods discussed above.
&lt;/p&gt;
&lt;p&gt;
I would like to rephrase Zhigang&amp;#39;s question: What does biology do with tractions? Since Zhigang called for speculation, here goes:&amp;nbsp;I like the suggestion that the main role of&amp;nbsp;these tractions may not be locomotion. I suggest that these contact points with the external world are the cell&amp;#39;s way sensing the environment and&amp;nbsp;regulating forces that trigger biochemical processes of the cell. Since the maximum force that can be generated is dictated by the substrate stiffness and&amp;nbsp;not the internal workings of the cell,&amp;nbsp;in experiencing these tractions, the cell is sensing the substrate stiffness and hence the environment. There may be some simple ways of testing this hypothesis.
&lt;/p&gt;
&lt;br class=&quot;clear&quot; /&gt;</description>
 <pubDate>Mon, 03 Mar 2008 22:24:04 -0500</pubDate>
 <dc:creator>Ravi-Chandar</dc:creator>
 <guid isPermaLink="false">comment 6692 at http://imechanica.org</guid>
</item>
<item>
 <title>Dear Ning,


Thanks for the</title>
 <link>http://imechanica.org/node/2786#comment-6690</link>
 <description>&lt;p&gt;
Dear Ning,
&lt;/p&gt;
&lt;p&gt;
Thanks for the rerferences.&amp;nbsp; I was actually traveling on a train while composing these answers off line and didn&amp;#39;t see your last post where you answer Zhigang&amp;#39;s last question and offer Yu-li&amp;#39;s paper as a reference.&amp;nbsp; You make interesting points that are related to cell signalling and, as a mechanician, I can&amp;nbsp; take up your challenge only to a certain point.
&lt;/p&gt;
&lt;p&gt;
I have always wondered why &amp;quot;overcoming of viscous drag&amp;quot; has been named as the main (or any) purpose of tractions.&amp;nbsp; Cells deform collagen matrices in which they are embedded (3D) and there is no viscous drag involved.&amp;nbsp; The viscous drag, if present physiologically (blood vessels) or in the petri dish,&amp;nbsp; is primarily matched by the ultimate strenght of adhesions (cohesive zone&amp;nbsp; @ crack tip in fracture mechanics comes to mind).
&lt;/p&gt;
&lt;p&gt;
Biologists use &amp;quot;traction forces&amp;quot; and &amp;quot;contractile forces&amp;quot; interchangeable (as Yu-Li did in the 2006 paper), but they are not the same thing.&amp;nbsp; Tractions, as we measure them indirectly, are the final outputs of acto-myosin contraction in the cytoskeleton, but before they &amp;#39;come out&amp;#39; and are measured by our traction assays,&amp;nbsp; some of it is lost in transmission through the focal adhesions and integrins.&amp;nbsp;
&lt;/p&gt;
&lt;p&gt;
I realize this might appear as nitpicking, but because of the above I think we should not use terms such as &amp;quot;inhibit tractions&amp;quot;, because we can only inhibit various molecules in the cell and the effect of that can also affect tractions.&amp;nbsp; So, by using blebbistatin, we only inhibit acto-myosin machinery and we (or better, I) don&amp;#39;t know what it does to focal adhesions.
&lt;/p&gt;
&lt;p&gt;
Actually, if blebbistatin dissolves the focal adhesions, then it will make it&lt;br /&gt;
easy for the cells to continue migrating despite of lack of acto-myosin&lt;br /&gt;
contraction.&amp;nbsp; But I really ought not to go deeper into biochemistry&lt;br /&gt;
issues, as I am not familiar with them.
&lt;/p&gt;
&lt;p&gt;
The bottom line is, blebbistatin inhibits myosin-II so it is understandable that the tractions drop.&amp;nbsp; Migration, however, needs adhesion turnover as explained in many migration papers (see any review by Horwitz, also check Cell Migration Consortium website), and adhesion turnover is regulated by GTP-binding proteins (Rho, Rac and CdC-42) among other things.&amp;nbsp; I would still not necessarily conclude that tractions are not necessary for migration: remember that Yu-li&amp;#39;s experiment is a perturbation of an already existing steady-state migration.&amp;nbsp; I am currently working on several methods that would help me look into tractions as they are being generated. &amp;nbsp;&amp;nbsp;
&lt;/p&gt;
&lt;p&gt;
To summarize, tractions have probably the largest role in maintaining the structural stability of the cell in the specific attachment configurations (single-cell spread out, packed monolayers, tissue).&amp;nbsp; As a corrolary, tractions are therefore important for maintainging the direction of migration.&amp;nbsp; Finally, there would be no sensing without the traction mechanism--that is easy to check just by plating the cells on 1/2-stiff and 1/2-compliant substrate as Yu-Li did long time ago in the 2000 Biophys J paper (he didn&amp;#39;t try blebbistatin there though).
&lt;/p&gt;
&lt;p&gt;
&amp;nbsp;
&lt;/p&gt;
&lt;br class=&quot;clear&quot; /&gt;</description>
 <pubDate>Mon, 03 Mar 2008 22:03:30 -0500</pubDate>
 <dc:creator>Vesna Damljanovic</dc:creator>
 <guid isPermaLink="false">comment 6690 at http://imechanica.org</guid>
</item>
<item>
 <title>Tractions not important for cell migration?</title>
 <link>http://imechanica.org/node/2786#comment-6689</link>
 <description>&lt;p&gt;Dear Vesna, Thank you for&lt;br /&gt;
your comments and sharing some of your unpublished results.&amp;nbsp; Many&lt;br /&gt;
people originally believed that the primary purpose of tractions is for&lt;br /&gt;
cell migration; that&amp;#39;s why people measure tractions during cell&lt;br /&gt;
migration.&amp;nbsp; However, in the paper by Benigno KA and YL Wang et al in&lt;br /&gt;
Traction forces of fibroblasts are regulated by the Rho-dependent&lt;br /&gt;
kinase but not by the myosin light chain kinase.&amp;nbsp; Arch Biochem Biophys. 2006 Dec 15;456(2):224-3. Epub 2006 Oct 11, they stated that &amp;quot;The lack of inhibition of cell migration by blebbistatin and Y-27632 [&lt;a name=&quot;bbib18&quot; title=&quot;bbib18&quot;&gt;&lt;/a&gt;&lt;a href=&quot;http://www.sciencedirect.com/science?_ob=ArticleURL&amp;amp;_udi=B6WB5-4M3B6FT-1&amp;amp;_user=571676&amp;amp;_rdoc=1&amp;amp;_fmt=&amp;amp;_orig=search&amp;amp;_sort=d&amp;amp;view=c&amp;amp;_acct=C000029040&amp;amp;_version=1&amp;amp;_urlVersion=0&amp;amp;_userid=571676&amp;amp;md5=0804b65da3a4904a790dfe411bab2912#bib18&quot;&gt;[18]&lt;/a&gt;, &lt;a name=&quot;bbib32&quot; title=&quot;bbib32&quot;&gt;&lt;/a&gt;&lt;a href=&quot;http://www.sciencedirect.com/science?_ob=ArticleURL&amp;amp;_udi=B6WB5-4M3B6FT-1&amp;amp;_user=571676&amp;amp;_rdoc=1&amp;amp;_fmt=&amp;amp;_orig=search&amp;amp;_sort=d&amp;amp;view=c&amp;amp;_acct=C000029040&amp;amp;_version=1&amp;amp;_urlVersion=0&amp;amp;_userid=571676&amp;amp;md5=0804b65da3a4904a790dfe411bab2912#bib32&quot;&gt;[32]&lt;/a&gt; and &lt;a name=&quot;bbib33&quot; title=&quot;bbib33&quot;&gt;&lt;/a&gt;&lt;a href=&quot;http://www.sciencedirect.com/science?_ob=ArticleURL&amp;amp;_udi=B6WB5-4M3B6FT-1&amp;amp;_user=571676&amp;amp;_rdoc=1&amp;amp;_fmt=&amp;amp;_orig=search&amp;amp;_sort=d&amp;amp;view=c&amp;amp;_acct=C000029040&amp;amp;_version=1&amp;amp;_urlVersion=0&amp;amp;_userid=571676&amp;amp;md5=0804b65da3a4904a790dfe411bab2912#bib33&quot;&gt;[33]&lt;/a&gt;;&lt;br /&gt;
unpublished observations], despite the nearly total inhibition of&lt;br /&gt;
traction forces, raises serious questions about the biological function&lt;br /&gt;
of traction forces, which were previously believed to be involved in&lt;br /&gt;
overcoming adhesive resistance and propelling forward migration.&amp;quot;&lt;/p&gt;
&lt;p&gt;
&lt;a href=&quot;http://www.sciencedirect.com/science?_ob=ArticleURL&amp;amp;_udi=B6WB5-4M3B6FT-1&amp;amp;_user=571676&amp;amp;_rdoc=1&amp;amp;_fmt=&amp;amp;_orig=search&amp;amp;_sort=d&amp;amp;view=c&amp;amp;_acct=C000029040&amp;amp;_version=1&amp;amp;_urlVersion=0&amp;amp;_userid=571676&amp;amp;md5=0804b65da3a4904a790dfe411bab2912#bbib18&quot;&gt;[18]&lt;/a&gt; G. Totsukawa, Y. Wu, Y. Sasaki, D.J. Hartshorne, Y. Yamakita, S. Yamashiro and F. Matsumura, &lt;em&gt;J. Cell Biol.&lt;/em&gt; &lt;strong&gt;164&lt;/strong&gt; (2004), pp. 427-439.  
&lt;/p&gt;
&lt;p&gt;
&lt;a href=&quot;http://www.sciencedirect.com/science?_ob=ArticleURL&amp;amp;_udi=B6WB5-4M3B6FT-1&amp;amp;_user=571676&amp;amp;_rdoc=1&amp;amp;_fmt=&amp;amp;_orig=search&amp;amp;_sort=d&amp;amp;view=c&amp;amp;_acct=C000029040&amp;amp;_version=1&amp;amp;_urlVersion=0&amp;amp;_userid=571676&amp;amp;md5=0804b65da3a4904a790dfe411bab2912#bbib32&quot;&gt;[32]&lt;/a&gt; J. de Rooij, A. Kerstens, G. Danuser, M.A. Shwartz and C.M. Waterman-Storer, &lt;em&gt;J. Cell Biol.&lt;/em&gt; &lt;strong&gt;171&lt;/strong&gt; (2005), pp. 153-164. 
&lt;/p&gt;
&lt;p&gt;
&lt;a href=&quot;http://www.sciencedirect.com/science?_ob=ArticleURL&amp;amp;_udi=B6WB5-4M3B6FT-1&amp;amp;_user=571676&amp;amp;_rdoc=1&amp;amp;_fmt=&amp;amp;_orig=search&amp;amp;_sort=d&amp;amp;view=c&amp;amp;_acct=C000029040&amp;amp;_version=1&amp;amp;_urlVersion=0&amp;amp;_userid=571676&amp;amp;md5=0804b65da3a4904a790dfe411bab2912#bbib33&quot;&gt;[33]&lt;/a&gt; W.-H. Guo, M.T. Frey, N.A. Burnham and Y.-L. Wang, &lt;em&gt;Biophys. J.&lt;/em&gt; &lt;strong&gt;90&lt;/strong&gt; (2005), pp. 2213-2220.
&lt;/p&gt;
&lt;p&gt;It is now open for discussion: what is the primary role of tractions of a living cell?&amp;nbsp; I would like to see comments on this.&lt;/p&gt;
&lt;p&gt;
&amp;nbsp;
&lt;/p&gt;
&lt;p&gt;
&amp;nbsp;
&lt;/p&gt;
&lt;br class=&quot;clear&quot; /&gt;</description>
 <pubDate>Mon, 03 Mar 2008 16:47:00 -0500</pubDate>
 <dc:creator>Ning Wang</dc:creator>
 <guid isPermaLink="false">comment 6689 at http://imechanica.org</guid>
</item>
<item>
 <title> Biological Aspects</title>
 <link>http://imechanica.org/node/2786#comment-6687</link>
 <description>&lt;p class=&quot;MsoNormal&quot;&gt;
&amp;nbsp;&lt;br /&gt;
Regarding biological aspects, it is always hard to make definitive judgment from experimental data in a complex system such as a cell.&amp;nbsp; There is no guarantee that all the parameters we think we are keeping fixed are really fixed while we perturb the few parameters of interest.&amp;nbsp; Often the smallest departure from the model renders the original assumption invalid (e.g., Ning&amp;rsquo;s example of non-zero normal stress for moderately spread cells).&amp;nbsp; Different experimental scenario often results in opposing results (e.g., correlation between tractions and adhesion size that I mentioned earlier).&amp;nbsp; What makes it difficult for us mechanicians to quantify is the way biologists utilize perturbations in experiments: inhibit a target protein or complex to understand the mechanism in which this protein is thought to be implicated.&amp;nbsp; Difficulty is in that this always alters other mechanisms which often affect the mechanism you are trying to characterize.&lt;/p&gt;
&lt;p&gt;Also, beeing unfamiliar with mechanics, biologists are hard pressed to simplify it, and often make conclusions that are based on real life experience rather than in-depth knowledge of mechanics laws.&amp;nbsp; That is how, for example, in the traction assays beginings, migration has been explained as cell front towing the passive cell body and the rear, but in fact, the trailing edge of any migrating cell is generating substantial tractions, is affecting the directionality and magnitude of leading edge tractions and is everything but passive.&lt;/p&gt;
&lt;p&gt;So, as I indicated earlier, making definitive conclusions is really hard in this kind of complex system. &lt;/p&gt;
&lt;p&gt;I have begun to understand this complexity in my earlier experiments (unpublished) with paxillin (one of the key focal adhesion proteins) and tractions:&amp;nbsp;&amp;nbsp; it turns out that paxillin-null cells generate equal&amp;nbsp; or higher tractions than normal cells, but are completely unable to move (these cells are from mouse embryo&amp;mdash;due to lack of cell migration ability, these mice die before they complete embryogenesis).&amp;nbsp; My conclusion was that other focal adhesion molecules take over the transmission of tractions but the adhesion turnover (which is necessary for migration) does not happen because of the lack of paxillin (whose biochemical role in adhesion turnover has been known for some time).&lt;/p&gt;
&lt;p&gt;In that vein, I haven&amp;rsquo;t yet seen Yu-Li&amp;rsquo;s new work you mention, Ning.&amp;nbsp; What do you mean by &amp;lsquo;inhibiting tractions&amp;rsquo;?&amp;nbsp; There are quite a few molecules that are implicated in traction generation and, as far as I am aware, no single one is the ultimate switch with full on-off ability.&amp;nbsp;&amp;nbsp; Is it the published paper or work in progress? I would be very interested to hear about it.
&lt;/p&gt;
&lt;p class=&quot;MsoNormal&quot;&gt;
&lt;span&gt; &lt;/span&gt;
&lt;/p&gt;
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 <pubDate>Mon, 03 Mar 2008 15:32:03 -0500</pubDate>
 <dc:creator>Vesna Damljanovic</dc:creator>
 <guid isPermaLink="false">comment 6687 at http://imechanica.org</guid>
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 <title>Mechanics Aspects</title>
 <link>http://imechanica.org/node/2786#comment-6686</link>
 <description>&lt;p&gt;Zhigang , Ning has answered some of your questions regarding biology, so I will not elaborate, otherwise we&amp;rsquo;ll start a whole new journal club topic.&amp;nbsp; I was quite keen on a different, mechanics-style discussion&amp;mdash;it is up to us, who come to these problems from mechanics background, to provide the accurate tools to biologists, even if it takes them a long time to fully appreciate them.&amp;nbsp; &lt;/p&gt;
&lt;p&gt;&amp;nbsp;3D case is hard but not impossible experimentally and mathematically, and biologists are quite excited about it hoping to use it to match the &amp;lsquo;physiological conditions&amp;rsquo;, so yes, it is on my &amp;lsquo;to-do&amp;rsquo; list.&amp;nbsp; But in the situation where we are barely beginning to understand the bits and pieces from the 2D case, 3D case will be exciting but it will take a long time before it can be really helpful because of the added mathematical and experimental complexity.&amp;nbsp; &lt;/p&gt;
&lt;p&gt;So, I believe the greatest challenge this technique is facing right now is to establish how large an error we are making with a small strain assumption in 2D.&amp;nbsp; Also, how does the noise in the displacement affect this error?&amp;nbsp; Biologists cannot provide the answers but we can, so I hope I can induce&amp;nbsp; the people on this forum to discuss it.&amp;nbsp;&lt;/p&gt;
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 <pubDate>Mon, 03 Mar 2008 15:11:48 -0500</pubDate>
 <dc:creator>Vesna Damljanovic</dc:creator>
 <guid isPermaLink="false">comment 6686 at http://imechanica.org</guid>
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 <title>Dear Zhigang:  Thank you</title>
 <link>http://imechanica.org/node/2786#comment-6683</link>
 <description>&lt;p&gt;
&lt;span&gt;Dear Zhigang:&lt;span&gt;&amp;nbsp; &lt;/span&gt;Thank you for your probing questions. &lt;span&gt;&amp;nbsp;&lt;/span&gt;I will try my best to address them. &lt;span&gt;&amp;nbsp;&lt;/span&gt;I am sure that you will not be completely satisfied,&lt;br /&gt;
but that may be the fun of all these.&lt;span&gt;&amp;nbsp; &lt;/span&gt;Ning&lt;/span&gt;
&lt;/p&gt;
&lt;p class=&quot;MsoNormal&quot;&gt;
&lt;span&gt;Issue 2:&lt;/span&gt;&lt;span&gt; &lt;/span&gt;&lt;span&gt;Beningo KA, Dembo M, Wang&lt;br /&gt;
YL. &lt;/span&gt;&lt;span&gt;Responses&lt;br /&gt;
of fibroblasts to anchorage of dorsal extracellular matrix receptors.&lt;/span&gt;&lt;span&gt; &lt;em&gt;Proc Natl Acad Sci USA&lt;/em&gt;&lt;br /&gt;
101:18024-18029, 2004. &lt;/span&gt;
&lt;/p&gt;
&lt;p class=&quot;MsoNormal&quot;&gt;
&lt;span&gt;Mierke CT&lt;/span&gt;&lt;span&gt;, Rosel D, Fabry B, Brabek J.&lt;br /&gt;
Contractile forces in tumor cell migration.&lt;br /&gt;
Eur J Cell Biol. 2008 Feb 22; [Epub ahead of print]&lt;/span&gt;
&lt;/p&gt;
&lt;p class=&quot;MsoNormal&quot;&gt;
&lt;span&gt;Issue 3: No.&amp;nbsp; It is true that focal adhesions do&lt;br /&gt;
transmit large tractions.&amp;nbsp; However, it does not mean other structures do&lt;br /&gt;
not.&amp;nbsp; A 2001 paper in Nat Cell Biol by Balaban et al quantified tractions&lt;br /&gt;
only at focal adhesions.&amp;nbsp; Our work suggests that other dynamic adhesive&lt;br /&gt;
structures may generate large tractions too.&lt;/span&gt;
&lt;/p&gt;
&lt;p class=&quot;MsoNormal&quot;&gt;
&lt;span&gt;Issue 4: There is some nice discussion on the role of&lt;br /&gt;
tractions in cell migration in the paper by Beningo KA, Hamao K, Dembo M, Wang&lt;br /&gt;
YL, Hosoya H &lt;span class=&quot;pages&quot;&gt;(2006)&lt;/span&gt; Traction forces of fibroblasts are&lt;br /&gt;
regulated by the Rho-dependent kinase but not by the myosin light chain&lt;br /&gt;
kinase.&amp;nbsp; &lt;em&gt;Arch Biochem Biophys&lt;/em&gt; &lt;span class=&quot;volume&quot;&gt;456:&lt;/span&gt;&lt;span class=&quot;pages&quot;&gt;224-31&lt;/span&gt;.&lt;span&gt;&amp;nbsp; &lt;/span&gt;Maybe the&lt;br /&gt;
primary function of tractions is not for overcoming viscous drag for cell&lt;br /&gt;
migration after all.&lt;span&gt;&amp;nbsp; &lt;/span&gt;It is likely that&lt;br /&gt;
tractions are used by cells for deforming structures, sensing the physical&lt;br /&gt;
environment, and orienting internal and external structures.&lt;span&gt;&amp;nbsp; &lt;/span&gt;It is likely that other important roles of&lt;br /&gt;
tractions are yet to be discovered. &lt;span&gt;&amp;nbsp;&amp;nbsp;&lt;/span&gt;&lt;/span&gt;
&lt;/p&gt;
&lt;p class=&quot;MsoNormal&quot;&gt;
&amp;nbsp;
&lt;/p&gt;
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 <pubDate>Mon, 03 Mar 2008 09:43:50 -0500</pubDate>
 <dc:creator>Ning Wang</dc:creator>
 <guid isPermaLink="false">comment 6683 at http://imechanica.org</guid>
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 <title>Re:  Tractions are fundamental processes of biology</title>
 <link>http://imechanica.org/node/2786#comment-6679</link>
 <description>&lt;p&gt;
Dear Ning:&amp;nbsp; Many thanks.&amp;nbsp; It has always been good to learn from you.&amp;nbsp; A few followup questions:
&lt;/p&gt;
&lt;ul&gt;
&lt;li&gt;Issue 2, can you point to a paper or two that describe experimental methods to measure &amp;quot;traction&amp;quot; in a 3D matrix?&lt;/li&gt;
&lt;li&gt;Issue 3, has your recent work been published?&amp;nbsp; Can you point to it?
	&lt;/li&gt;
&lt;li&gt;Issue 4 goes to the bottom of what I wanted to know:&amp;nbsp; what can the bologist do with the measured traction?&amp;nbsp; Hope that you and others can expand this part of the discussion.&amp;nbsp; Hard facts are good.&amp;nbsp; Speculations are even better.&amp;nbsp; A description of possible approaches to study these speculations (or hypotheses?) would teach us uninitiated how you bioloists work. &lt;/li&gt;
&lt;/ul&gt;
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 <pubDate>Sun, 02 Mar 2008 19:39:32 -0500</pubDate>
 <dc:creator>Zhigang Suo</dc:creator>
 <guid isPermaLink="false">comment 6679 at http://imechanica.org</guid>
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