normal mode analysis
Relationship between disease-specific structures of amyloid fibrils and their mechanical properties
Gwonchan Yoon, Young Gab Kim, Kilho Eom*, Sungsoo Na*
Mechanical Characterization of Amyloid Fibrils Using Coarse-Grained Normal Mode Analysis
Gwonchan Yoon, Jinhak Kwak, Jae In Kim, Sungsoo Na, and Kilho Eom
Domain decomposition-based structural condensation of large protein structures for understanding their conformational dynamicsSubmitted by Kilho Eom on Sat, 2010-09-11 03:27.
The preprint provides the summary and/or review of current state-of-art in coarse-grained modeling of protein structures for normal mode analysis. This review summarizes the quasiharmonic analysis, Go model, elastic network model, and recently suggested coarse-grained models for protein structures.