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normal mode analysis

Relationship between disease-specific structures of amyloid fibrils and their mechanical properties

Submitted by Kilho Eom on
research
normal mode analysis
elastic network model
Coarse-Grained Modeling
amyloid fibril
beam model
disease specificity

Relationship between disease-specific structures of amyloid fibrils and their mechanical properties

Gwonchan Yoon, Young Gab Kim, Kilho Eom*, Sungsoo Na*

 

ABSTRACT

Mechanical Characterization of Amyloid Fibrils Using Coarse-Grained Normal Mode Analysis

Submitted by Kilho Eom on
research
normal mode analysis
elastic network model
Elastic properties
amyloid fibril
structure-property relation
shear effect
Timoshenko beam model

Mechanical Characterization of Amyloid Fibrils Using Coarse-Grained Normal Mode Analysis

Gwonchan Yoon, Jinhak Kwak, Jae In Kim, Sungsoo Na, and Kilho Eom

Abstract

Review: Coarse-grained model for normal mode analysis of proteins

Submitted by Kilho Eom on
research
Protein dynamics
coarse-graining
normal mode analysis
elastic network model
Go model

The preprint provides the summary and/or review of current state-of-art in coarse-grained modeling of protein structures for normal mode analysis. This review summarizes the quasiharmonic analysis, Go model, elastic network model, and recently suggested coarse-grained models for protein structures.

Abstract 

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